Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831073.1_cds_XP_016504355.1_17809
CDS Infomation

[gene=LOC107822342] [db_xref=GeneID:107822342] [protein=AP2-like ethylene-responsive transcription factor PLT2] [protein_id=XP_016504355.1] [location=join(40009..40147,40228..40633,40976..41058,41191..41199,41303..41391,41507..41580,42085..42135,42261..42337,43266..43999)] [gbkey=CDS]
Sequence

ATGAATTCAAACAACTGGCTATCTTTTCCACTATCTCCCACTCATTCATCTTTACCTCCA
CATCTACAAACAACTCAATCTCATCACTTTACTTTAGGGTTAGTGAATGAGACCATTGAC
AATCCCTTCCAAAACCAAGAATGGAACTTAATGAACACACAAGGAAGCAATGAAGTTCCA
AAGGTGGCTGATTTTCTTGGAGTGAACAAATCTGATGAAAACCAATCTGAATTAGTCCAT
TACAACGAAATCCAATCGAACGATTCAGATTATCTTTTTCAAAACAATAGCCTTATGCCA
ATGCAAAATGCTTTAGCTCCAACAGGCAACTATGAACTTCAAGAAAATGCTTGTAATATT
CAATCTTTGACATTATCAATGGGAAGTGGAAAAGGTTCAACTAGTGAAACAAGTGCTAGT
CCAAGTGTTGCCACTACTACAGCAAATGCAAGTGAAAATAGTAATACTAGTATTGTTGAA
GCTGTACCTAGAAGGACTTTGGATACTTTTGGCCAAAGAACATCAATTTATAGAGGTGTA
ACTAGACATAGATGGACAGGAAGATATGAAGCACATCTATGGGATAATAGCTGTAGAAGG
GAAGGGCAATCAAGAAAGGGTCGTCAAGTGTACTTGGGAGGGTATGATAAGGAGGAGAAG
GCAGCTAGGGCTTATGATCTTGCTGCATTGAAATACTGGGGAACATCTACCACTACTAAT
TTCCCAATTAGCAACTATGAGAAGGAACTGGAAGATATGAAGCACATGACAAGGCAAGAA
TTTGTTGCTGCAATTAGAAGGAAGAGTAGTGGGTTCTCCAGGGGTGCATCAATGTATCGT
GGTGTAACAAGGCACCACCAGCATGGAAGATGGCAAGCAAGGATTGGAAGAGTTGCTGGA
AACAAAGATCTCTACTTGGGAACTTTCACTACTGAGGAAGAAGCAGCAGAAGCATATGAC
ATAGCAGCAATAAAATTCAGAGGCTTAAATGCAGTGACAAATTTCGACATGAATCGTTAT
GATGTGAAAGCTATACTCGAAAGCAACACTCTTCCTATAGGAGGAGGAGCAGCAAAAAGG
CTAAAAGAAGCACAAGCTCTTGAATCCTCAAGAAAAAGAGATCAAGAAATGATAGCTCTA
AACTCAAGTTTCCAATATGGTAACTCAAGTAATTCTTCAAATAACCCTTTACACGCCTAT
CCTTTATTGCAACAACAGCCCTTTAGTATTGAATCTCATCAACCCTTAATGACTCTCCAA
AATCAAGAATCATCACTTTTTCACCAGAGTTATCTCCAAACACAACTTCAACTTCACCCC
GCATCGCAGAATACTCATTACGATTCTACTCATCAATTCTACAACAATTATCTTCAGAGT
AATCCGGTTTTCTTGCATGGGTTGATGGAGAATGGTGGAGGAAGTTCGAGTACTGGAAGT
TACAGTACTGGAGGATATTTTGGTAATTCAACTGGACTCGGCGTTATAAGTTCAAATTCA
AAATCAGGTAATGGAGTAGGAGGAGGAAATGGAGAGGAAGTTGCACTTGTGAAAGTTGAT
TATGATAATATGCCAGTTACTGGAAGTAATTACAATGGTTGGTCAGGAGATTCATCAGTT
CAAGGATCAAATCCTGGTGTTTTCTCAATGTGGAATGATTGA

Peptide Sequence

PEP ID

XP_016504355.1
PEP Infomation

PREDICTED: AP2-like ethylene-responsive transcription factor PLT2 [Nicotiana tabacum]
Sequence

MNSNNWLSFPLSPTHSSLPPHLQTTQSHHFTLGLVNETIDNPFQNQEWNLMNTQGSNEVP
KVADFLGVNKSDENQSELVHYNEIQSNDSDYLFQNNSLMPMQNALAPTGNYELQENACNI
QSLTLSMGSGKGSTSETSASPSVATTTANASENSNTSIVEAVPRRTLDTFGQRTSIYRGV
TRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTN
FPISNYEKELEDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAG
NKDLYLGTFTTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKAILESNTLPIGGGAAKR
LKEAQALESSRKRDQEMIALNSSFQYGNSSNSSNNPLHAYPLLQQQPFSIESHQPLMTLQ
NQESSLFHQSYLQTQLQLHPASQNTHYDSTHQFYNNYLQSNPVFLHGLMENGGGSSSTGS
YSTGGYFGNSTGLGVISSNSKSGNGVGGGNGEEVALVKVDYDNMPVTGSNYNGWSGDSSV
QGSNPGVFSMWND

Transcript Sequence

Gene sequence data has not been registered.